Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative peptidase | SAMEA3472114_02548 | Not Available | Positive | 2642282 - 2643493 | 44806.4 |
| phenylhydantoinase | SAMEA3472114_02549 | Not Available | Positive | 2643546 - 2644931 | 51060.2 |
| carbamate kinase | SAMEA3472114_02550 | Not Available | Positive | 2644979 - 2645911 | 33072.9 |
| nad(p)-binding rossman fold | SAMEA3472114_02551 | Not Available | Negative | 2645952 - 2647577 | 57697.5 |
| selenium-dependent hydroxylase accessory protein yqec | SAMEA3472114_02552 | Not Available | Negative | 2647625 - 2648395 | 28179.1 |
| ctp:molybdopterin cytidylyltransferase | SAMEA3472114_02553 | Not Available | Positive | 2648561 - 2649076 | 19246.5 |
| pyridine nucleotide-disulfide oxidoreductase | SAMEA3472114_02554 | Not Available | Positive | 2649398 - 2652496 | 115658.0 |
| putative amidohydrolase | SAMEA3472114_02555 | Not Available | Positive | 2652499 - 2653827 | 48887.3 |
| putative fad binding molybdopterin dehydrogenase | SAMEA3472114_02556 | Not Available | Positive | 2653878 - 2654657 | 28635.2 |
| selenate reductase subunit ygfn | SAMEA3472114_02557 | Not Available | Positive | 2654654 - 2657524 | 103527.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





