Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of uncharacterised function (duf2566) | SAMEA3472114_02538 | Not Available | Negative | 2630412 - 2630591 | 6706.58 |
| protein | SAMEA3472114_02539 | Not Available | Negative | 2630658 - 2632268 | 60371.6 |
| Trna-gly | Not Available | Not Available | Positive | 2632502 - 2632575 | Not Available |
| lipoprotein yger | SAMEA3472114_02541 | Not Available | Negative | 2632654 - 2633409 | 26566.1 |
| xanthine dehydrogenase subunit xdha | SAMEA3472114_02542 | Not Available | Positive | 2633824 - 2636121 | 82663.0 |
| xanthine dehydrogenase fad-binding subunit | SAMEA3472114_02543 | Not Available | Positive | 2636132 - 2637010 | 31586.7 |
| xanthine dehydrogenase iron-sulfur-binding subunit | SAMEA3472114_02544 | Not Available | Positive | 2637007 - 2637486 | 16922.7 |
| transcriptional regulator | SAMEA3472114_02545 | Not Available | Negative | 2637526 - 2639304 | 66087.0 |
| putative aspartate/ornithine carbamoyltransferase | SAMEA3472114_02546 | Not Available | Positive | 2639783 - 2640970 | 44058.7 |
| putative diaminopropionate ammonia-lyase | SAMEA3472114_02547 | Not Available | Positive | 2641028 - 2642224 | 43330.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





