Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion protein eprj | SAMEA3472114_02518 | Not Available | Negative | 2620147 - 2620311 | 6169.27 |
| type iii secretion epri protein | SAMEA3472114_02519 | Not Available | Negative | 2620539 - 2620694 | 5843.8 |
| type iii secretion eprh protein | SAMEA3472114_02520 | Not Available | Negative | 2620708 - 2621889 | 45248.8 |
| transcriptional regulator | SAMEA3472114_02521 | Not Available | Positive | 2622147 - 2622647 | 19143.0 |
| type iii secretion system protein | SAMEA3472114_02522 | Not Available | Positive | 2622649 - 2622942 | 11046.2 |
| type iii secretion system protein | SAMEA3472114_02523 | Not Available | Negative | 2623004 - 2623366 | 13860.6 |
| flhb/hrpn/yscu/spas family protein | SAMEA3472114_02524 | Not Available | Negative | 2623393 - 2623596 | 8275.5 |
| type iii secretion system protein spas | SAMEA3472114_02525 | Not Available | Negative | 2623664 - 2624134 | 18027.6 |
| type iii secretion system protein | SAMEA3472114_02526 | Not Available | Negative | 2624143 - 2624910 | 28287.8 |
| type iii secretion system protein | SAMEA3472114_02527 | Not Available | Negative | 2624912 - 2625172 | 9429.87 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





