Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3472114_02508 | Not Available | Negative | 2612748 - 2613173 | 16286.5 |
| type iii secretion-associated chaperone | SAMEA3472114_02509 | Not Available | Positive | 2614082 - 2614573 | 19034.1 |
| putative invasion genes regulator | SAMEA3472114_02510 | Not Available | Positive | 2614908 - 2616284 | 52712.8 |
| uncharacterised protein | SAMEA3472114_02511 | Not Available | Positive | 2616452 - 2616670 | 8055.23 |
| peptidoglycan-binding-like protein precursor | SAMEA3472114_02512 | Not Available | Positive | 2616753 - 2617229 | 18294.5 |
| putative 2-component transcriptional regulator | SAMEA3472114_02513 | Not Available | Negative | 2617274 - 2617717 | 16594.2 |
| response regulator protein | SAMEA3472114_02514 | Not Available | Negative | 2617751 - 2617906 | 5584.88 |
| putative oxygen-regulated invasion protein | SAMEA3472114_02515 | Not Available | Negative | 2618127 - 2618558 | 16981.1 |
| putative oxygen-regulated invasion protein | SAMEA3472114_02516 | Not Available | Negative | 2618775 - 2619356 | 22783.7 |
| type iii secretion system protein | SAMEA3472114_02517 | Not Available | Negative | 2619372 - 2620106 | 27624.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





