Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arabinose-proton symporter | SAMEA3472114_02498 | Not Available | Negative | 2603577 - 2604995 | 51687.6 |
| 2-keto-3-deoxygluconate oxidoreductase | SAMEA3472114_02499 | Not Available | Negative | 2605310 - 2606071 | 27043.6 |
| 5-keto-4-deoxyuronate isomerase | SAMEA3472114_02500 | Not Available | Negative | 2606101 - 2606937 | 31078.1 |
| putative acyltransferase | SAMEA3472114_02501 | Not Available | Negative | 2607224 - 2608405 | 41007.2 |
| membrane protein | SAMEA3472114_02502 | Not Available | Positive | 2608660 - 2609889 | 45101.9 |
| bipartite regulator domain | SAMEA3472114_02503 | Not Available | Positive | 2610349 - 2610981 | 24445.4 |
| uncharacterised protein | SAMEA3472114_02504 | Not Available | Negative | 2611063 - 2611194 | 5236.59 |
| putative transcriptional regulator | SAMEA3472114_02505 | Not Available | Positive | 2611315 - 2612124 | 30838.8 |
| fidl-like protein | SAMEA3472114_02506 | Not Available | Positive | 2612117 - 2612599 | 18720.5 |
| small stress response protein | SAMEA3472114_02507 | Not Available | Negative | 2612632 - 2612772 | 5621.96 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





