Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna mismatch repair protein | SAMEA3472114_02486 | Not Available | Positive | 2592474 - 2593163 | 25500.9 |
| integral membrane transport protein | SAMEA3472114_02487 | Not Available | Positive | 2593232 - 2593945 | 26159.0 |
| lipoprotein | SAMEA3472114_02488 | Not Available | Positive | 2594083 - 2594301 | 7877.35 |
| putative aldo/keto reductase | SAMEA3472114_02489 | Not Available | Positive | 2594409 - 2595449 | 38501.7 |
| major facilitator superfamily protein | SAMEA3472114_02490 | Not Available | Negative | 2595481 - 2596674 | 41634.2 |
| aas bifunctional protein | SAMEA3472114_02491 | Not Available | Negative | 2596667 - 2598826 | 80729.8 |
| galactose operon repressor | SAMEA3472114_02494 | Not Available | Positive | 2599412 - 2600443 | 37140.3 |
| diaminopimelate decarboxylase | SAMEA3472114_02495 | Not Available | Negative | 2600450 - 2601712 | 46180.0 |
| lysr family transcriptional regulator | SAMEA3472114_02496 | Not Available | Positive | 2601834 - 2602769 | 34424.7 |
| putative asp/glu/hydantoin racemase | SAMEA3472114_02497 | Not Available | Negative | 2602756 - 2603448 | 25309.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





