Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exodeoxyribonuclease v gamma subunit | SAMEA3472114_02476 | Not Available | Negative | 2581871 - 2585239 | 128871.0 |
| prepilin peptidase-dependent protein c | SAMEA3472114_02477 | Not Available | Negative | 2585252 - 2585575 | 11956.6 |
| protein | SAMEA3472114_02478 | Not Available | Negative | 2585560 - 2585967 | 14886.1 |
| prepilin peptidase dependent protein b | SAMEA3472114_02479 | Not Available | Negative | 2585964 - 2586527 | 20509.6 |
| prepilin peptidase-dependent protein a | SAMEA3472114_02480 | Not Available | Negative | 2586518 - 2586988 | 17866.3 |
| thymidylate synthetase | SAMEA3472114_02481 | Not Available | Negative | 2587173 - 2587967 | 30481.4 |
| prolipoprotein diacylglyceryl transferase | SAMEA3472114_02482 | Not Available | Negative | 2587974 - 2588849 | 33109.0 |
| phosphoenolpyruvate-protein phosphotransferase (pts system, enzyme i) | SAMEA3472114_02483 | Not Available | Negative | 2589000 - 2591246 | 83734.8 |
| (di)nucleoside polyphosphate hydrolase | SAMEA3472114_02484 | Not Available | Negative | 2591259 - 2591789 | 20796.0 |
| uncharacterised protein | SAMEA3472114_02485 | Not Available | Negative | 2592142 - 2592288 | 5231.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





