Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| domain of uncharacterised function, duf446 | SAMEA3472114_02444 | Not Available | Negative | 2546594 - 2546923 | 12772.2 |
| putative secy-interacting protein | SAMEA3472114_02446 | Not Available | Negative | 2547545 - 2548090 | 20709.6 |
| nadph-dependent 7-cyano-7-deazaguanine reductase | SAMEA3472114_02447 | Not Available | Positive | 2548158 - 2549006 | 32547.2 |
| putative decarboxylase | SAMEA3472114_02448 | Not Available | Positive | 2549118 - 2550482 | 50975.0 |
| serine transporter | SAMEA3472114_02449 | Not Available | Positive | 2551039 - 2552328 | 46909.2 |
| l-serine dehydratase 2 | SAMEA3472114_02450 | Not Available | Positive | 2552386 - 2553753 | 48724.8 |
| 5'-3' exonuclease | SAMEA3472114_02451 | Not Available | Positive | 2553775 - 2554620 | 31456.9 |
| lactaldehyde reductase (propanediol oxidoreductase) | SAMEA3472114_02452 | Not Available | Negative | 2554675 - 2555823 | 40515.7 |
| l-fuculose phosphate aldolase | SAMEA3472114_02453 | Not Available | Negative | 2555851 - 2556498 | 23786.7 |
| l-fucose permease | SAMEA3472114_02454 | Not Available | Positive | 2557045 - 2558361 | 47547.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





