Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative short chain dehydrogenase | SAMEA3472114_02424 | Not Available | Negative | 2522177 - 2522962 | 28085.6 |
| major facilitator superfamily protein | SAMEA3472114_02425 | Not Available | Positive | 2523281 - 2524558 | 46803.5 |
| putative sugar kinase | SAMEA3472114_02426 | Not Available | Positive | 2524585 - 2526063 | 54195.9 |
| domain of uncharacterised function (duf2825) | SAMEA3472114_02427 | Not Available | Positive | 2526697 - 2527161 | 16562.2 |
| 7-carboxy-7-deazaguanine synthase | SAMEA3472114_02428 | Not Available | Negative | 2527557 - 2528228 | 25061.1 |
| small protein involved in the cell envelope stress response | SAMEA3472114_02429 | Not Available | Positive | 2528367 - 2528507 | 5307.34 |
| protein | SAMEA3472114_02430 | Not Available | Positive | 2528521 - 2529393 | 32221.3 |
| enolase | SAMEA3472114_02431 | Not Available | Negative | 2529453 - 2530751 | 45657.6 |
| ctp synthetase | SAMEA3472114_02432 | Not Available | Negative | 2530839 - 2532476 | 60377.7 |
| nucleoside triphosphate pyrophosphohydrolase | SAMEA3472114_02433 | Not Available | Negative | 2532704 - 2533495 | 30414.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





