Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfite reductase (nadph) hemoprotein beta subunit | SAMEA3472114_02414 | Not Available | Negative | 2511076 - 2512788 | 63963.8 |
| sulfite reductase (nadph) flavoprotein alpha subunit | SAMEA3472114_02415 | Not Available | Negative | 2512788 - 2514587 | 66283.4 |
| 6-pyruvoyl tetrahydrobiopterin synthase | SAMEA3472114_02416 | Not Available | Positive | 2514903 - 2515268 | 13773.6 |
| putative fad-dependent oxidoreductase | SAMEA3472114_02417 | Not Available | Positive | 2515346 - 2516617 | 46215.6 |
| ferredoxin-like protein ygco | SAMEA3472114_02418 | Not Available | Positive | 2516608 - 2516868 | 9636.47 |
| glycerol antiterminator regulatory protein | SAMEA3472114_02419 | Not Available | Positive | 2516885 - 2517460 | 20787.6 |
| electron transfer flavoprotein subunit ygcq | SAMEA3472114_02420 | Not Available | Negative | 2517608 - 2518468 | 30307.4 |
| electron transfer flavoprotein subunit ygcr | SAMEA3472114_02421 | Not Available | Negative | 2518465 - 2519244 | 28750.1 |
| major facilitator superfamily protein | SAMEA3472114_02422 | Not Available | Negative | 2519222 - 2520631 | 50862.3 |
| putative fad-binding oxidoreductase | SAMEA3472114_02423 | Not Available | Negative | 2520653 - 2522107 | 53698.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





