Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionyl-trna formyltransferase | SAMEA3472114_02403 | Not Available | Negative | 2503374 - 2504321 | 34156.4 |
| polypeptide deformylase | SAMEA3472114_02404 | Not Available | Negative | 2504336 - 2504845 | 19329.6 |
| dna protecting protein dpra | SAMEA3472114_02405 | Not Available | Positive | 2504975 - 2506099 | 40994.3 |
| protein smg | SAMEA3472114_02406 | Not Available | Positive | 2506071 - 2506544 | 18484.2 |
| putative dna topoisomerase | SAMEA3472114_02407 | Not Available | Positive | 2506573 - 2507115 | 19862.0 |
| ribosome maturation factor | SAMEA3472114_02408 | Not Available | Positive | 2507120 - 2507692 | 20641.7 |
| shikimate dehydrogenase | SAMEA3472114_02409 | Not Available | Positive | 2507697 - 2508515 | 29388.3 |
| transcriptional regulator | SAMEA3472114_02410 | Not Available | Positive | 2508512 - 2508769 | 10007.5 |
| putative transferase | SAMEA3472114_02411 | Not Available | Negative | 2508745 - 2509299 | 20246.3 |
| phosphoadenosine phosphosulfate reductase | SAMEA3472114_02413 | Not Available | Negative | 2510268 - 2511002 | 28000.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





