Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l23 | SAMEA3472114_02372 | Not Available | Positive | 2486851 - 2487153 | 11199.8 |
| 50s ribosomal protein l2 | SAMEA3472114_02373 | Not Available | Positive | 2487171 - 2487992 | 29862.3 |
| 30s ribosomal protein s19 | SAMEA3472114_02374 | Not Available | Positive | 2488009 - 2488287 | 10430.9 |
| 50s ribosomal protein l22 | SAMEA3472114_02375 | Not Available | Positive | 2488302 - 2488634 | 12227.0 |
| 30s ribosomal protein s3 | SAMEA3472114_02376 | Not Available | Positive | 2488652 - 2489353 | 25984.8 |
| 50s ribosomal protein l16 | SAMEA3472114_02377 | Not Available | Positive | 2489366 - 2489776 | 15282.1 |
| 50s ribosomal protein l29 | SAMEA3472114_02378 | Not Available | Positive | 2489776 - 2489967 | 7273.91 |
| 30s ribosomal protein s17 | SAMEA3472114_02379 | Not Available | Positive | 2489967 - 2490221 | 9705.01 |
| 50s ribosomal protein l14 | SAMEA3472114_02380 | Not Available | Positive | 2490386 - 2490757 | 13541.9 |
| 50s ribosomal protein l24 | SAMEA3472114_02381 | Not Available | Positive | 2490768 - 2491082 | 11316.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





