Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fkbp-type peptidyl-prolyl isomerase | SAMEA3472114_02342 | Not Available | Positive | 2461106 - 2461918 | 28913.4 |
| putative dna-binding transcriptional regulator | SAMEA3472114_02343 | Not Available | Positive | 2462085 - 2462807 | 26822.1 |
| trna 2-thiouridine synthesizin protein d (sulfurtransferase) | SAMEA3472114_02344 | Not Available | Positive | 2462807 - 2463193 | 13653.1 |
| trna 2-thiouridine synthesizing protein c | SAMEA3472114_02345 | Not Available | Positive | 2463193 - 2463552 | 13035.7 |
| trna 2-thiouridine synthesizing protein b | SAMEA3472114_02346 | Not Available | Positive | 2463560 - 2463847 | 10692.9 |
| 30s ribosomal protein s12 | SAMEA3472114_02347 | Not Available | Positive | 2463973 - 2464347 | 13737.9 |
| 30s ribosomal protein s7 | SAMEA3472114_02348 | Not Available | Positive | 2464444 - 2464914 | 17605.4 |
| translation elongation factor g | SAMEA3472114_02349 | Not Available | Positive | 2465011 - 2467125 | 77585.8 |
| protein chain elongation factor ef-tu | SAMEA3472114_02350 | Not Available | Positive | 2467196 - 2468380 | 43286.1 |
| bifunctional chitinase/lysozyme | SAMEA3472114_02351 | Not Available | Positive | 2468672 - 2471383 | 97640.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





