Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein | SAMEA3472114_02312 | Not Available | Positive | 2431187 - 2432491 | 46447.2 |
| putative dna-binding protein | SAMEA3472114_02313 | Not Available | Positive | 2432503 - 2433588 | 38561.7 |
| dna-binding transcriptional regulator frlr | SAMEA3472114_02314 | Not Available | Negative | 2433740 - 2434471 | 27822.2 |
| fructoselysine kinase | SAMEA3472114_02315 | Not Available | Negative | 2434571 - 2435356 | 28351.3 |
| fructoselysine 3-epimerase | SAMEA3472114_02316 | Not Available | Negative | 2435353 - 2436183 | 31156.7 |
| fructoselysine-6-p-deglycase | SAMEA3472114_02317 | Not Available | Negative | 2436233 - 2437255 | 38571.3 |
| fructoselysine transporter | SAMEA3472114_02318 | Not Available | Negative | 2437276 - 2438613 | 47579.2 |
| secreted peptide | SAMEA3472114_02319 | Not Available | Negative | 2438908 - 2439075 | 5819.16 |
| siroheme synthase | SAMEA3472114_02320 | Not Available | Negative | 2439322 - 2440695 | 49954.4 |
| nitrite transporter | SAMEA3472114_02321 | Not Available | Negative | 2440714 - 2441520 | 28564.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





