Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna adenine methylase | SAMEA3472114_02302 | Not Available | Positive | 2422631 - 2423467 | 32087.2 |
| ribulose-phosphate 3-epimerase | SAMEA3472114_02303 | Not Available | Positive | 2423485 - 2424162 | 24555.7 |
| phosphoglycolate phosphatase | SAMEA3472114_02304 | Not Available | Positive | 2424155 - 2424913 | 27434.8 |
| tryptophanyl-trna synthetase | SAMEA3472114_02305 | Not Available | Positive | 2424906 - 2425910 | 37468.0 |
| amino acid transporter | SAMEA3472114_02306 | Not Available | Positive | 2426179 - 2427084 | 33479.4 |
| prd domain protein,/aha_3910 family | SAMEA3472114_02307 | Not Available | Positive | 2427101 - 2427463 | 13528.5 |
| alanine racemase like protein | SAMEA3472114_02308 | Not Available | Positive | 2427547 - 2428710 | 42400.9 |
| metalloenzyme superfamily protein | SAMEA3472114_02309 | Not Available | Positive | 2428710 - 2429936 | 44551.2 |
| phosphotriesterase-like protein | SAMEA3472114_02310 | Not Available | Positive | 2429933 - 2430811 | 32855.3 |
| protein | SAMEA3472114_02311 | Not Available | Positive | 2430822 - 2431175 | 12476.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





