Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adp compounds hydrolase | SAMEA3472114_02292 | Not Available | Positive | 2412397 - 2412957 | 21154.4 |
| penicillin-binding protein 1a | SAMEA3472114_02293 | Not Available | Negative | 2413122 - 2415674 | 93598.4 |
| pilus assembly protein | SAMEA3472114_02294 | Not Available | Positive | 2415794 - 2416573 | 29028.9 |
| putative fimbrial assembly protein | SAMEA3472114_02295 | Not Available | Positive | 2416573 - 2417112 | 20850.2 |
| protein involved in utilization of dna as a carbon source | SAMEA3472114_02296 | Not Available | Positive | 2417096 - 2417536 | 16902.1 |
| protein involved in utilization of dna as a carbon source | SAMEA3472114_02297 | Not Available | Positive | 2417526 - 2417930 | 15099.1 |
| outer membrane porin hofq | SAMEA3472114_02298 | Not Available | Positive | 2417872 - 2419041 | 42818.9 |
| shikimate kinase i | SAMEA3472114_02299 | Not Available | Positive | 2419480 - 2420001 | 19539.2 |
| 3-dehydroquinate synthase | SAMEA3472114_02300 | Not Available | Positive | 2420058 - 2421146 | 38856.3 |
| damx protein | SAMEA3472114_02301 | Not Available | Positive | 2421238 - 2422524 | 46148.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





