Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail fiber protein | SAMEA3472114_03899 | Not Available | Negative | 4001373 - 4003460 | 69536.3 |
| Tail protein i | SAMEA3472114_03900 | Not Available | Negative | 4003457 - 4004062 | 22591.8 |
| Baseplate assembly protein | SAMEA3472114_03901 | Not Available | Negative | 4004055 - 4004963 | 32538.6 |
| Phage baseplate assembly protein | SAMEA3472114_03902 | Not Available | Negative | 4004950 - 4005309 | 12949.4 |
| Baseplate assembly protein v | SAMEA3472114_03903 | Not Available | Negative | 4005306 - 4005884 | 20866.7 |
| Virion morphogenesis protein | SAMEA3472114_03904 | Not Available | Negative | 4005953 - 4006399 | 17184.8 |
| Putative phage tail protein | SAMEA3472114_03905 | Not Available | Negative | 4006392 - 4006823 | 16130.1 |
| Lysb family phage lysis regulatory protein | SAMEA3472114_03906 | Not Available | Negative | 4006919 - 4007347 | 15824.8 |
| Hypothetical protein | SAMEA3472114_03907 | Not Available | Negative | 4007344 - 4007721 | 14037.0 |
| Lysozyme | SAMEA3472114_03908 | Not Available | Negative | 4007723 - 4008235 | 18637.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





