Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase with fad/nad(p)-binding domain | SAMEA3472114_02201 | Not Available | Positive | 2306506 - 2307708 | 43769.7 |
| inner membrane protein | SAMEA3472114_02202 | Not Available | Negative | 2308023 - 2309075 | 37659.3 |
| protein | SAMEA3472114_02203 | Not Available | Positive | 2309459 - 2311048 | 61008.1 |
| protein | SAMEA3472114_02204 | Not Available | Positive | 2311310 - 2312932 | 61349.9 |
| putative type i secretion system, inner membrane protein | SAMEA3472114_02205 | Not Available | Positive | 2313298 - 2314365 | 38908.7 |
| putative type i secretion system, atp-binding protein | SAMEA3472114_02206 | Not Available | Positive | 2314362 - 2317097 | 100775.0 |
| putative transporter subunit: membrane component of abc superfamily | SAMEA3472114_02207 | Not Available | Positive | 2317097 - 2318221 | 41050.2 |
| hicb family protein | SAMEA3472114_02208 | Not Available | Positive | 2318552 - 2318911 | 13403.0 |
| nickel responsive regulator | SAMEA3472114_02209 | Not Available | Negative | 2319031 - 2319432 | 15094.7 |
| nickel abc transporter, atp-binding protein | SAMEA3472114_02210 | Not Available | Negative | 2319438 - 2320244 | 29730.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





