Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cellulose synthase subunit bcsc | SAMEA3472114_02160 | Not Available | Positive | 2256066 - 2259539 | 127743.0 |
| putative diguanylate cyclase | SAMEA3472114_02161 | Not Available | Positive | 2259660 - 2261609 | 72954.9 |
| c4-dicarboxylate transport protein | SAMEA3472114_02162 | Not Available | Positive | 2261792 - 2263078 | 45439.2 |
| putative protease | SAMEA3472114_02163 | Not Available | Positive | 2263299 - 2264795 | 55502.4 |
| ketodeoxygluconokinase | SAMEA3472114_02164 | Not Available | Negative | 2264891 - 2265820 | 33963.2 |
| diguanylate phosphodiesterase | SAMEA3472114_02165 | Not Available | Positive | 2266052 - 2266819 | 29572.9 |
| putative outer membrane assembly protein | SAMEA3472114_02166 | Not Available | Positive | 2266889 - 2268949 | 74461.8 |
| major facilitator superfamily protein | SAMEA3472114_02167 | Not Available | Negative | 2269183 - 2270505 | 47180.9 |
| pp_02066 | SAMEA3472114_02168 | Not Available | Negative | 2270916 - 2271929 | Not Available |
| lysr family transcriptional regulator | SAMEA3472114_02169 | Not Available | Negative | 2271978 - 2272949 | 36039.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





