Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucosephosphate isomerase | SAMEA3472114_02061 | Not Available | Negative | 2151408 - 2153057 | 61591.1 |
| lysine-sensitive aspartokinase iii | SAMEA3472114_02063 | Not Available | Positive | 2153582 - 2154931 | 48566.6 |
| zeta toxin | SAMEA3472114_02064 | Not Available | Positive | 2155076 - 2156002 | 34484.5 |
| nucleotidyltransferase | SAMEA3472114_02065 | Not Available | Negative | 2156038 - 2156829 | 30478.6 |
| spfh domain-containing protein | SAMEA3472114_02066 | Not Available | Negative | 2156835 - 2157962 | 42349.5 |
| yjbd family (duf3811) | SAMEA3472114_02067 | Not Available | Positive | 2158492 - 2158764 | 10576.7 |
| ribosomal large subunit pseudouridine synthase f | SAMEA3472114_02068 | Not Available | Negative | 2158765 - 2159637 | 32448.5 |
| transcriptional regulator of sorbose uptake and utilization genes | SAMEA3472114_02069 | Not Available | Positive | 2159985 - 2160932 | 35046.0 |
| sorbitol-6-phosphate 2-dehydrogenase | SAMEA3472114_02070 | Not Available | Positive | 2161002 - 2161808 | 29009.7 |
| sorbose-specific pts system eiia component | SAMEA3472114_02071 | Not Available | Positive | 2161818 - 2162225 | 14797.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





