Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diacylglycerol kinase | SAMEA3472114_02040 | Not Available | Negative | 2129954 - 2130322 | 13245.4 |
| glycerol-3-phosphate acyltransferase | SAMEA3472114_02041 | Not Available | Positive | 2130493 - 2132916 | 91386.9 |
| 4-hydroxybenzoate octaprenyltransferase | SAMEA3472114_02042 | Not Available | Negative | 2133071 - 2133943 | 32499.6 |
| chorismate lyase | SAMEA3472114_02043 | Not Available | Negative | 2133956 - 2134453 | 18836.1 |
| putative type iii effector protein | SAMEA3472114_02044 | Not Available | Negative | 2134676 - 2136004 | 51551.6 |
| putative type iii effector protein | SAMEA3472114_02045 | Not Available | Negative | 2136062 - 2136256 | 7285.78 |
| uncharacterised protein | SAMEA3472114_02046 | Not Available | Positive | 2136358 - 2136510 | 5363.52 |
| maltose regulon periplasmic protein | SAMEA3472114_02047 | Not Available | Negative | 2136485 - 2137405 | 31917.2 |
| maltoporin (maltose-inducible porin) | SAMEA3472114_02048 | Not Available | Negative | 2137648 - 2138988 | 49970.0 |
| maltose/maltodextrin transporter atp-binding protein | SAMEA3472114_02049 | Not Available | Negative | 2139060 - 2140175 | 40993.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





