Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase h | SAMEA3472114_01998 | Not Available | Positive | 2083081 - 2083356 | 10287.2 |
| multidrug resistance protein | SAMEA3472114_01999 | Not Available | Positive | 2083375 - 2084406 | 36924.3 |
| multidrug resistance protein | SAMEA3472114_02000 | Not Available | Positive | 2084406 - 2086457 | 76228.3 |
| multidrug resistance outer membrane protein | SAMEA3472114_02001 | Not Available | Positive | 2086454 - 2087920 | 53437.3 |
| formate dehydrogenase-h subunit alpha | SAMEA3472114_02003 | Not Available | Positive | 2088586 - 2090265 | 62465.9 |
| sel1 domain-containing protein | SAMEA3472114_02004 | Not Available | Positive | 2090359 - 2091048 | 25080.4 |
| glutamate/aspartate:proton symporter | SAMEA3472114_02005 | Not Available | Negative | 2091126 - 2092439 | 47107.0 |
| formate-dependent nitrite reductase complex subunit nrfg | SAMEA3472114_02006 | Not Available | Negative | 2092781 - 2093377 | 22759.5 |
| formate-dependent nitrite reductase complex subunit | SAMEA3472114_02007 | Not Available | Negative | 2093374 - 2093757 | 14543.0 |
| heme lyase subunit nrfe | SAMEA3472114_02008 | Not Available | Negative | 2093750 - 2095372 | 60274.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





