Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional activator | SAMEA3472114_01947 | Not Available | Positive | 2026146 - 2027684 | 57856.1 |
| cadaverine/lysine antiporter | SAMEA3472114_01948 | Not Available | Positive | 2028050 - 2029384 | 46667.8 |
| lysine decarboxylase 1 | SAMEA3472114_01949 | Not Available | Positive | 2029464 - 2031611 | 81264.7 |
| putative oligopeptide transporter | SAMEA3472114_01950 | Not Available | Positive | 2031670 - 2033127 | 53043.7 |
| lysyl-trna synthetase | SAMEA3472114_01951 | Not Available | Positive | 2033364 - 2034881 | 57829.9 |
| putative inner membrane protein | SAMEA3472114_01952 | Not Available | Negative | 2035000 - 2035173 | 6555.44 |
| protein | SAMEA3472114_01953 | Not Available | Negative | 2035201 - 2035497 | 11467.6 |
| acyltransferase with acyl-coa n-acyltransferase domain | SAMEA3472114_01954 | Not Available | Negative | 2035724 - 2035996 | 10469.6 |
| uncharacterized conserved protein | SAMEA3472114_01955 | Not Available | Negative | 2036008 - 2036238 | 8650.47 |
| two-component sensor kinase | SAMEA3472114_01956 | Not Available | Positive | 2036419 - 2038050 | 60553.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





