Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Host killer protein | SAMEA3472114_02708 | Not Available | Negative | 2803633 - 2803788 | 5737.24 |
| toxin of the rele-relb toxin-antitoxin system | SAMEA3472114_02709 | Not Available | Negative | 2803860 - 2804147 | 11225.8 |
| antitoxin of the rele-relb toxin-antitoxin system and transcriptional repressor of relbef | SAMEA3472114_02710 | Not Available | Negative | 2804147 - 2804386 | 9072.01 |
| qin prophage protein | SAMEA3472114_02711 | Not Available | Positive | 2804919 - 2805251 | 12177.5 |
| transposase | SAMEA3472114_02712 | Not Available | Negative | 2805688 - 2806542 | 32743.6 |
| putative integrase/transposase | SAMEA3472114_02713 | Not Available | Negative | 2806500 - 2807027 | 20696.3 |
| Lygf | SAMEA3472114_02714 | Not Available | Negative | 2807061 - 2807480 | 15985.4 |
| Replication protein | SAMEA3472114_02715 | Not Available | Negative | 2807521 - 2808486 | 37057.1 |
| Putative cii repressor | SAMEA3472114_02716 | Not Available | Negative | 2808467 - 2808988 | 19909.8 |
| Regulatory protein cro (antirepressor) | SAMEA3472114_02717 | Not Available | Negative | 2808972 - 2809199 | 8418.91 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





