Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative dna repair protein | SAMEA3472114_01937 | Not Available | Positive | 2020519 - 2020995 | 17759.5 |
| cp4-44 prophage | SAMEA3472114_01938 | Not Available | Positive | 2021064 - 2021285 | 8411.2 |
| uncharacterised protein | SAMEA3472114_01939 | Not Available | Positive | 2021285 - 2021398 | 4260.86 |
| antitoxin of the yeev-yeeu toxin-antitoxin system | SAMEA3472114_01940 | Not Available | Positive | 2021448 - 2021816 | 13584.0 |
| toxin of the yeev-yeeu toxin-antitoxin system | SAMEA3472114_01941 | Not Available | Positive | 2021906 - 2022283 | 14359.3 |
| aec77 | SAMEA3472114_01942 | Not Available | Positive | 2022280 - 2022768 | 18171.7 |
| aec78 | SAMEA3472114_01943 | Not Available | Positive | 2022780 - 2022977 | 7412.81 |
| putative restriction methylase | SAMEA3472114_01944 | Not Available | Positive | 2023074 - 2023919 | 32811.4 |
| s-adenosylhomocysteine hydrolase | SAMEA3472114_01945 | Not Available | Positive | 2023988 - 2024383 | 14611.8 |
| nucleotidyl transferase of uncharacterised function (duf1814) | SAMEA3472114_01946 | Not Available | Positive | 2024376 - 2025323 | 36263.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





