Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein ytfj | SAMEA3472114_01826 | Not Available | Positive | 1922753 - 1923307 | 20495.7 |
| uncharacterised protein | SAMEA3472114_01827 | Not Available | Negative | 1923397 - 1924068 | 25454.4 |
| cysq protein | SAMEA3472114_01828 | Not Available | Negative | 1924521 - 1925261 | 27191.4 |
| bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein | SAMEA3472114_01829 | Not Available | Positive | 1925451 - 1927394 | 70926.0 |
| putative transcriptional regulator ytfh | SAMEA3472114_01830 | Not Available | Negative | 1927512 - 1927892 | 14076.0 |
| nad(p)h:quinone oxidoreductase | SAMEA3472114_01831 | Not Available | Positive | 1927981 - 1928841 | 29767.2 |
| membrane protein ytff | SAMEA3472114_01832 | Not Available | Positive | 1928949 - 1929914 | 35225.6 |
| regulator of cell morphogenesis and no signaling | SAMEA3472114_01833 | Not Available | Positive | 1930022 - 1930684 | 24956.1 |
| d-serine/d-alanine/glycine transporter | SAMEA3472114_01834 | Not Available | Negative | 1930729 - 1932141 | 51662.6 |
| fkbp-type 22 kda peptidyl-prolyl cis-trans isomerase | SAMEA3472114_01835 | Not Available | Negative | 1932450 - 1933070 | 22217.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





