Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative lysogenization regulator | SAMEA3472114_01743 | Not Available | Negative | 1833763 - 1834404 | 22949.0 |
| pp_01664 | SAMEA3472114_01744 | Not Available | Negative | 1834440 - 1835546 | Not Available |
| uncharacterised protein | SAMEA3472114_01766 | Not Available | Negative | 1849081 - 1849509 | 15883.7 |
| transcriptional regulator | SAMEA3472114_01767 | Not Available | Negative | 1850852 - 1851634 | 29041.2 |
| deoxyribokinase | SAMEA3472114_01768 | Not Available | Positive | 1851940 - 1852860 | 33223.8 |
| major facilitator superfamily protein | SAMEA3472114_01769 | Not Available | Positive | 1852888 - 1854204 | 48503.2 |
| deoxyribose specific mutarotase | SAMEA3472114_01770 | Not Available | Positive | 1854216 - 1855229 | 38147.6 |
| putative transposase (partial) | SAMEA3472114_01771 | Not Available | Positive | 1855650 - 1855904 | 9546.79 |
| pts system eiic component | SAMEA3472114_01772 | Not Available | Negative | 1856151 - 1857407 | 44342.8 |
| pts system transporter subunit iib | SAMEA3472114_01773 | Not Available | Negative | 1857420 - 1857707 | 10034.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





