Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroorotase | SAMEA3472114_01607 | Not Available | Negative | 1720722 - 1721768 | 38828.6 |
| putative lipoprotein | SAMEA3472114_01608 | Not Available | Negative | 1721874 - 1722434 | 20501.0 |
| glutaredoxin | SAMEA3472114_01609 | Not Available | Negative | 1722568 - 1723215 | 24351.6 |
| multidrug resistance protein mdth | SAMEA3472114_01610 | Not Available | Negative | 1723279 - 1724145 | 32030.3 |
| multidrug resistance protein mdth | SAMEA3472114_01611 | Not Available | Negative | 1724138 - 1724473 | 12530.8 |
| ribosomal-protein-alanine acetyltransferase | SAMEA3472114_01612 | Not Available | Positive | 1724709 - 1725293 | 22689.1 |
| conserved protein, upf0502 family | SAMEA3472114_01613 | Not Available | Positive | 1725304 - 1725951 | 24140.7 |
| putative oxidoreductase | SAMEA3472114_01614 | Not Available | Positive | 1725953 - 1726876 | 33683.4 |
| integral membrane protein mvin | SAMEA3472114_01615 | Not Available | Positive | 1726986 - 1728521 | 55270.8 |
| flagella synthesis protein flgn | SAMEA3472114_01616 | Not Available | Negative | 1728561 - 1728887 | 12442.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





