Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase-1 operon protein hyaf | SAMEA3472114_01526 | Not Available | Positive | 1637093 - 1637950 | 31432.5 |
| cytochrome bd-ii oxidase subunit i | SAMEA3472114_01527 | Not Available | Positive | 1638084 - 1639628 | 57996.3 |
| cytochrome bd-ii oxidase subunit 2 | SAMEA3472114_01528 | Not Available | Positive | 1639640 - 1640776 | 42427.3 |
| small predicted membrane protein | SAMEA3472114_01529 | Not Available | Positive | 1640789 - 1640881 | 3597.68 |
| periplasmic appa protein | SAMEA3472114_01530 | Not Available | Positive | 1640961 - 1642259 | 47075.6 |
| cryptic autophosphorylating protein tyrosine kinase etk | SAMEA3472114_01531 | Not Available | Negative | 1642379 - 1644559 | 81290.6 |
| phosphotyrosine-protein phosphatase | SAMEA3472114_01532 | Not Available | Negative | 1644579 - 1645025 | 16386.9 |
| polysaccharide export protein | SAMEA3472114_01533 | Not Available | Negative | 1645013 - 1646152 | 41762.2 |
| putative lipoprotein | SAMEA3472114_01534 | Not Available | Negative | 1646198 - 1648294 | 78680.2 |
| group 4 capsule (g4c) polysaccharide, ymcb | SAMEA3472114_01535 | Not Available | Negative | 1648294 - 1649040 | 27297.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





