Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative oxidoreductase | SAMEA3472114_01516 | Not Available | Negative | 1629123 - 1630298 | 43804.8 |
| acylphosphatase | SAMEA3472114_01517 | Not Available | Positive | 1630408 - 1630686 | 10270.3 |
| sulfurtransferase tuse | SAMEA3472114_01518 | Not Available | Negative | 1630683 - 1631012 | 12411.0 |
| putative carrier/transport protein | SAMEA3472114_01519 | Not Available | Negative | 1631103 - 1631762 | 23364.3 |
| Trna-ser | Not Available | Not Available | Positive | 1631969 - 1632056 | Not Available |
| hydrogenase 1, small subunit | SAMEA3472114_01521 | Not Available | Positive | 1632483 - 1633601 | 40696.6 |
| hydrogenase-1 large subunit | SAMEA3472114_01522 | Not Available | Positive | 1633598 - 1635391 | 66238.0 |
| ni/fe-hydrogenase 1 b-type cytochrome subunit | SAMEA3472114_01523 | Not Available | Positive | 1635410 - 1636117 | 27598.8 |
| hydrogenase 1 maturation protease | SAMEA3472114_01524 | Not Available | Positive | 1636114 - 1636701 | 21547.7 |
| hydrogenase-1 operon protein | SAMEA3472114_01525 | Not Available | Positive | 1636698 - 1637096 | 14871.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





