Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative peptidase m, neutral zinc metallopeptidases, zinc-binding site | SAMEA3472114_01760 | Not Available | Negative | 1844407 - 1845546 | 43025.7 |
| Repressor protein | SAMEA3472114_01761 | Not Available | Negative | 1845676 - 1846161 | 18313.8 |
| Antirepressor protein | SAMEA3472114_01762 | Not Available | Positive | 1846479 - 1846706 | 7963.69 |
| Cii decision making protein | SAMEA3472114_01763 | Not Available | Positive | 1846737 - 1847276 | 20136.2 |
| Replication protein o | SAMEA3472114_01764 | Not Available | Positive | 1847288 - 1848292 | 37172.4 |
| Replication protein 14 | SAMEA3472114_01765 | Not Available | Positive | 1848289 - 1849002 | 27359.6 |
| Attr | Not Available | Not Available | Positive | 1848800 - 1848814 | Not Available |
| Host specificity protein | SAMEA3472114_02674 | Not Available | Negative | 2776113 - 2779511 | 124544.0 |
| Attl | Not Available | Not Available | Positive | 2777564 - 2777576 | Not Available |
| Tail assembly protein | SAMEA3472114_02675 | Not Available | Negative | 2779572 - 2780120 | 18863.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





