Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| icmf-like protein | SAMEA3472114_01396 | Not Available | Positive | 1496614 - 1500138 | 134304.0 |
| impa domain protein | SAMEA3472114_01397 | Not Available | Positive | 1500149 - 1501501 | 50765.5 |
| hcp-like protein | SAMEA3472114_01398 | Not Available | Positive | 1501525 - 1502007 | 18000.5 |
| inner membrane protein yafu | SAMEA3472114_01399 | Not Available | Positive | 1502051 - 1502965 | 34023.4 |
| uncharacterised protein | SAMEA3472114_01400 | Not Available | Positive | 1502975 - 1503454 | 18130.8 |
| aminopeptidase | SAMEA3472114_01401 | Not Available | Negative | 1503591 - 1504376 | 29591.2 |
| Trna-asp | Not Available | Not Available | Positive | 1504704 - 1504780 | Not Available |
| dna polymerase iii subunit epsilon | SAMEA3472114_01403 | Not Available | Negative | 1504913 - 1505653 | 27389.9 |
| ribonuclease h | SAMEA3472114_01404 | Not Available | Positive | 1505709 - 1506176 | 17597.9 |
| s-adenosyl-l-methionine-dependent methyltransferase | SAMEA3472114_01405 | Not Available | Negative | 1506173 - 1506895 | 27212.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





