Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative pyridine nucleotide-disulfide oxidoreductase | SAMEA3472114_01335 | Not Available | Positive | 1425810 - 1427135 | 48243.1 |
| inner membrane protein | SAMEA3472114_01336 | Not Available | Positive | 1427492 - 1428085 | 21886.7 |
| putatve transcriptional regulator ykga | SAMEA3472114_01337 | Not Available | Positive | 1428676 - 1429527 | 33630.3 |
| uncharacterised protein | SAMEA3472114_01338 | Not Available | Positive | 1429484 - 1429642 | 6359.84 |
| ig domain-containing protein | SAMEA3472114_01339 | Not Available | Negative | 1429667 - 1433923 | 149900.0 |
| small predicted membrane protein | SAMEA3472114_01340 | Not Available | Positive | 1435038 - 1435139 | 3999.01 |
| 50s ribosomal protein l31 | SAMEA3472114_01341 | Not Available | Positive | 1435500 - 1435766 | 10051.9 |
| 50s ribosomal protein l36 | SAMEA3472114_01342 | Not Available | Positive | 1435766 - 1435906 | 5466.94 |
| putative fimbrial transcriptional regulator | SAMEA3472114_01343 | Not Available | Positive | 1436992 - 1437534 | 21205.7 |
| fimbrillin | SAMEA3472114_01344 | Not Available | Positive | 1437609 - 1438196 | 20126.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





