Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative signal transduction protein | SAMEA3472114_01325 | Not Available | Negative | 1412351 - 1413439 | 40727.3 |
| high-affinity choline transport protein (bcct-family transporter) | SAMEA3472114_01326 | Not Available | Negative | 1414314 - 1416347 | 75846.5 |
| transcriptional regulator beti | SAMEA3472114_01327 | Not Available | Positive | 1416476 - 1417063 | 21806.4 |
| betaine aldehyde dehydrogenase | SAMEA3472114_01328 | Not Available | Positive | 1417077 - 1418549 | 52899.1 |
| choline dehydrogenase | SAMEA3472114_01329 | Not Available | Positive | 1418563 - 1420233 | 61881.1 |
| inner membrane protein | SAMEA3472114_01330 | Not Available | Positive | 1420446 - 1421114 | 25590.3 |
| transporter | SAMEA3472114_01331 | Not Available | Negative | 1421357 - 1422052 | 25228.2 |
| putative electron transport protein ykgf | SAMEA3472114_01332 | Not Available | Negative | 1422045 - 1423472 | 53055.0 |
| hydroxyacid oxidoreductase (fe-s centre) | SAMEA3472114_01333 | Not Available | Negative | 1423483 - 1424202 | 26069.9 |
| transcriptional regulator ykgd | SAMEA3472114_01334 | Not Available | Negative | 1424730 - 1425584 | 31532.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





