Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytosine deaminase | SAMEA3472114_01305 | Not Available | Negative | 1389030 - 1390313 | 47611.9 |
| cytosine permease | SAMEA3472114_01306 | Not Available | Negative | 1390303 - 1391562 | 43680.4 |
| propionate--coa ligase | SAMEA3472114_01307 | Not Available | Negative | 1391894 - 1393780 | 69439.8 |
| 2-methylcitrate dehydratase | SAMEA3472114_01308 | Not Available | Negative | 1393820 - 1395271 | 53984.8 |
| 2-methylcitrate synthase | SAMEA3472114_01309 | Not Available | Negative | 1395305 - 1396474 | 43136.6 |
| methylisocitrate lyase | SAMEA3472114_01310 | Not Available | Negative | 1396519 - 1397409 | 32079.4 |
| propionate catabolism operon regulatory protein | SAMEA3472114_01311 | Not Available | Positive | 1397647 - 1399233 | 58634.9 |
| protein | SAMEA3472114_01312 | Not Available | Negative | 1399331 - 1399606 | 9895.93 |
| lyse family translocator | SAMEA3472114_01313 | Not Available | Positive | 1399792 - 1400424 | 23222.8 |
| Trna-pseudo | Not Available | Not Available | Positive | 1400676 - 1400756 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





