Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative tail tip assembly protein | SAMEA3472114_01732 | Not Available | Positive | 1818343 - 1821822 | 127289.0 |
| Putative lom-like outer membrane protein | SAMEA3472114_01733 | Not Available | Positive | 1821890 - 1822489 | 21595.0 |
| Tail fiber protein | SAMEA3472114_01734 | Not Available | Positive | 1822554 - 1824950 | 79710.4 |
| Attr | Not Available | Not Available | Positive | 1833074 - 1833085 | Not Available |
| Bifunctional nicotinamide mononucleotide adenylyltransferase/adp-ribose pyrophosphatase | SAMEA3472114_01745 | Not Available | Negative | 1835600 - 1836061 | 17433.8 |
| ribosomal large subunit pseudouridine synthase e (rrna pseudouridylate synthase e) | SAMEA3472114_01746 | Not Available | Negative | 1836071 - 1836724 | 24881.8 |
| isocitrate dehydrogenase | SAMEA3472114_01747 | Not Available | Positive | 1836896 - 1838146 | 45772.4 |
| Attl | Not Available | Not Available | Positive | 1837635 - 1837649 | Not Available |
| Integrase | SAMEA3472114_01748 | Not Available | Negative | 1838260 - 1839402 | 43916.8 |
| excisionase | SAMEA3472114_01749 | Not Available | Negative | 1839392 - 1839628 | 8845.89 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





