Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhs core protein | SAMEA3472114_01109 | Not Available | Positive | 1177762 - 1179858 | 75477.0 |
| rhs core protein with extension | SAMEA3472114_01110 | Not Available | Positive | 1179907 - 1182624 | 103044.0 |
| uncharacterised protein | SAMEA3472114_01111 | Not Available | Positive | 1182651 - 1182872 | 8366.15 |
| type iv secretion protein rhs | SAMEA3472114_01112 | Not Available | Positive | 1182987 - 1183298 | 12207.7 |
| h repeat-associated protein | SAMEA3472114_01113 | Not Available | Positive | 1183402 - 1184538 | 43194.9 |
| bacteriophage n4 adsorption protein b | SAMEA3472114_01114 | Not Available | Positive | 1184807 - 1187044 | 85353.3 |
| bacteriophage n4 receptor, outer membrane subunit | SAMEA3472114_01115 | Not Available | Positive | 1187031 - 1190003 | 111401.0 |
| uncharacterised protein | SAMEA3472114_01116 | Not Available | Positive | 1190004 - 1190894 | 33000.5 |
| porin thermoregulatory protein | SAMEA3472114_01117 | Not Available | Positive | 1191077 - 1191838 | 28988.5 |
| Trna-arg | Not Available | Not Available | Positive | 1191884 - 1191960 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





