Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| permease dsdx | SAMEA3472114_00916 | Not Available | Positive | 965454 - 965672 | 7740.56 |
| d-serine dehydratase | SAMEA3472114_00917 | Not Available | Positive | 965690 - 967018 | 47903.3 |
| multidrug resistance protein y | SAMEA3472114_00918 | Not Available | Negative | 967126 - 968664 | 56018.5 |
| emrky-tolc multidrug resistance efflux pump, membrane fusion protein component | SAMEA3472114_00919 | Not Available | Negative | 968664 - 969827 | 42621.9 |
| dna-binding transcriptional activator evga | SAMEA3472114_00920 | Not Available | Positive | 970243 - 970857 | 22691.5 |
| hybrid sensory histidine kinase in two-component regulatory system with evga | SAMEA3472114_00921 | Not Available | Positive | 970862 - 974455 | 134779.0 |
| coa-transferase | SAMEA3472114_00922 | Not Available | Negative | 974511 - 975656 | 41673.2 |
| transporter yfdv | SAMEA3472114_00923 | Not Available | Negative | 975730 - 976674 | 33617.9 |
| oxalyl-coa decarboxylase | SAMEA3472114_00924 | Not Available | Negative | 976744 - 978438 | 60614.9 |
| putative transferase | SAMEA3472114_00925 | Not Available | Negative | 978492 - 979742 | 45830.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





