Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter protein | SAMEA3472114_00894 | Not Available | Positive | 946091 - 947023 | 34512.2 |
| Trna-arg | Not Available | Not Available | Positive | 947099 - 947173 | Not Available |
| prophage integrase | SAMEA3472114_00896 | Not Available | Positive | 947352 - 948614 | 48884.1 |
| putative phage regulatory protein | SAMEA3472114_00897 | Not Available | Positive | 949233 - 949454 | 8670.54 |
| uncharacterised protein | SAMEA3472114_00898 | Not Available | Positive | 949529 - 950404 | 33474.9 |
| putative major capsid protein from phage origin | SAMEA3472114_00899 | Not Available | Positive | 950415 - 951467 | 38245.2 |
| uncharacterised protein | SAMEA3472114_00902 | Not Available | Positive | 952070 - 952258 | 7203.83 |
| uncharacterised protein | SAMEA3472114_00903 | Not Available | Positive | 952261 - 952449 | 7292.82 |
| uncharacterised protein | SAMEA3472114_00904 | Not Available | Positive | 952446 - 952664 | 7730.37 |
| uncharacterised protein | SAMEA3472114_00905 | Not Available | Positive | 952732 - 953037 | 11193.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





