Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion protein gspj | SAMEA3472114_00742 | Not Available | Positive | 772784 - 773383 | 22193.2 |
| type ii secretion system protein k | SAMEA3472114_00743 | Not Available | Positive | 773386 - 774363 | 36544.3 |
| type ii secretion system protein l | SAMEA3472114_00744 | Not Available | Positive | 774360 - 775538 | 44115.3 |
| general secretion pathway protein yghd | SAMEA3472114_00745 | Not Available | Positive | 775540 - 776076 | 20382.7 |
| inner membrane protein | SAMEA3472114_00746 | Not Available | Negative | 776413 - 777948 | 57549.9 |
| putative restriction methylase | SAMEA3472114_00747 | Not Available | Negative | 778019 - 778864 | 32780.4 |
| aec78 | SAMEA3472114_00748 | Not Available | Negative | 778949 - 779371 | 15587.5 |
| toxin of the yeev-yeeu toxin-antitoxin system | SAMEA3472114_00749 | Not Available | Negative | 779368 - 779745 | 14162.8 |
| yagb/yeeu/yfjz family protein | SAMEA3472114_00750 | Not Available | Negative | 779912 - 780202 | 10994.1 |
| antitoxin of the yeev-yeeu toxin-antitoxin system | SAMEA3472114_00751 | Not Available | Negative | 780218 - 780862 | 24913.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





