Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s21 | SAMEA3472114_00628 | Not Available | Negative | 654261 - 654476 | 8500.42 |
| o-sialoglycoprotein endopeptidase | SAMEA3472114_00629 | Not Available | Positive | 654714 - 655727 | 36010.5 |
| putative tartrate carrier protein | SAMEA3472114_00630 | Not Available | Negative | 655770 - 657233 | 52909.5 |
| l-tartrate dehydratase subunit beta | SAMEA3472114_00631 | Not Available | Negative | 657281 - 657886 | 22680.8 |
| l-tartrate dehydratase subunit alpha | SAMEA3472114_00632 | Not Available | Negative | 657883 - 658794 | 32735.5 |
| transcriptional activator ttdr | SAMEA3472114_00633 | Not Available | Positive | 659001 - 659933 | 35316.6 |
| glycerol-3-phosphate acyltransferase plsy | SAMEA3472114_00634 | Not Available | Negative | 659946 - 660563 | 22194.7 |
| bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase | SAMEA3472114_00635 | Not Available | Positive | 660668 - 661036 | 13620.2 |
| undecaprenyl pyrophosphate phosphatase | SAMEA3472114_00636 | Not Available | Positive | 661126 - 661947 | 29760.6 |
| multifunctional cca protein | SAMEA3472114_00637 | Not Available | Negative | 662037 - 663275 | 46469.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





