Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0290 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1357138 bp
Thymine Count
1355714 bp
Guanine Count
1381291 bp
Cytosine Count
1387533 bp
Genome Length
5482789 bp
Protein-coding Genes
4858 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Abc transporter | SAMEA3472114_01434 | Not Available | Negative | 1527528 - 1529249 | 62911.1 |
| Hypothetical protein | SAMEA3472114_01672 | Not Available | Positive | 1783281 - 1783748 | 17261.9 |
| Attl | Not Available | Not Available | Positive | 1783474 - 1783485 | Not Available |
| Integrase | SAMEA3472114_01673 | Not Available | Negative | 1783852 - 1784970 | 42609.3 |
| excisionase for prophage | SAMEA3472114_01674 | Not Available | Negative | 1784939 - 1785208 | 10185.4 |
| Endodeoxyribonuclease | SAMEA3472114_01675 | Not Available | Negative | 1785270 - 1787741 | 92521.2 |
| putative prophage protein | SAMEA3472114_01676 | Not Available | Negative | 1787835 - 1788026 | 6814.29 |
| division inhibition protein | SAMEA3472114_01677 | Not Available | Negative | 1788023 - 1788211 | 6964.7 |
| uncharacterised protein | SAMEA3472114_01679 | Not Available | Positive | 1788611 - 1788778 | 6312.59 |
| uncharacterised protein | SAMEA3472114_01680 | Not Available | Positive | 1788772 - 1789005 | 8883.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





