Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative oxygen-regulated invasion protein | SAMEA3472108_00442 | Not Available | Positive | 448601 - 449182 | 22721.8 |
| putative oxygen-regulated invasion protein | SAMEA3472108_00443 | Not Available | Positive | 449124 - 449831 | 27423.1 |
| putative two-component response regulator | SAMEA3472108_00444 | Not Available | Positive | 450055 - 450687 | 23431.7 |
| putative lytic transglycosylase | SAMEA3472108_00445 | Not Available | Negative | 450705 - 451106 | 15518.1 |
| uncharacterised protein | SAMEA3472108_00446 | Not Available | Negative | 451292 - 451510 | 8077.23 |
| putative invasion genes regulator | SAMEA3472108_00447 | Not Available | Negative | 451678 - 453054 | 52646.7 |
| type iii secretion-associated chaperone | SAMEA3472108_00448 | Not Available | Negative | 453389 - 453880 | 18902.0 |
| uncharacterised protein | SAMEA3472108_00449 | Not Available | Negative | 454106 - 454597 | 18562.7 |
| uncharacterised protein | SAMEA3472108_00450 | Not Available | Negative | 454753 - 454848 | 3612.43 |
| uncharacterised protein | SAMEA3472108_00451 | Not Available | Positive | 455027 - 455452 | 16243.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





