Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine synthase b | SAMEA3472108_00105 | Not Available | Positive | 103627 - 104571 | 35089.2 |
| polynucleotide phosphorylase | SAMEA3472108_00108 | Not Available | Positive | 105236 - 107371 | 77106.6 |
| lipoprotein nlpi precursor | SAMEA3472108_00109 | Not Available | Positive | 107480 - 108364 | 33622.5 |
| atp-dependent rna helicase (dead-box protein) | SAMEA3472108_00110 | Not Available | Positive | 108544 - 110433 | 70580.6 |
| tryptophan-specific transport protein | SAMEA3472108_00111 | Not Available | Positive | 110587 - 111831 | 44369.2 |
| monooxygenase | SAMEA3472108_00112 | Not Available | Negative | 111948 - 112955 | 37131.4 |
| putative peptidase | SAMEA3472108_00113 | Not Available | Negative | 113036 - 113914 | 32458.9 |
| protease yhbu | SAMEA3472108_00114 | Not Available | Negative | 113923 - 114918 | 37044.2 |
| sterol-binding protein | SAMEA3472108_00115 | Not Available | Positive | 115127 - 115651 | 19673.0 |
| putative acetyltransferase | SAMEA3472108_00116 | Not Available | Positive | 115645 - 116148 | 18534.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





