Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | SAMEA3472108_03996 | Not Available | Negative | 4156250 - 4156996 | 27248.5 |
| Endopeptidase | SAMEA3472108_04143 | Not Available | Positive | 4329141 - 4329608 | 17086.6 |
| Hypothetical protein | SAMEA3472108_04144 | Not Available | Positive | 4329807 - 4330304 | 18628.1 |
| Hypothetical protein | SAMEA3472108_04145 | Not Available | Positive | 4330301 - 4330558 | 9868.98 |
| Hypothetical protein | SAMEA3472108_04146 | Not Available | Positive | 4330785 - 4331165 | 14268.9 |
| Duf2560 family protein | SAMEA3472108_04147 | Not Available | Positive | 4331269 - 4331511 | 9012.78 |
| Terminase small subunit | SAMEA3472108_04148 | Not Available | Positive | 4331547 - 4332035 | 18709.1 |
| Terminase large subunit | SAMEA3472108_04149 | Not Available | Positive | 4332013 - 4333512 | 57412.9 |
| Portal protein | SAMEA3472108_04150 | Not Available | Positive | 4333513 - 4335678 | 82469.3 |
| Capsid and scaffolding protein | SAMEA3472108_04151 | Not Available | Positive | 4335692 - 4336603 | 33902.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





