Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Baseplate assembly protein v | SAMEA3472108_00688 | Not Available | Positive | 690242 - 690820 | 20791.6 |
| Phage baseplate assembly protein | SAMEA3472108_00689 | Not Available | Positive | 690817 - 691176 | 12949.4 |
| Baseplate assembly protein | SAMEA3472108_00690 | Not Available | Positive | 691163 - 692071 | 32582.8 |
| Tail protein i | SAMEA3472108_00691 | Not Available | Positive | 692064 - 692669 | 22513.8 |
| Variable tail fiber protein | SAMEA3472108_00692 | Not Available | Positive | 692666 - 693925 | 43688.2 |
| Attr | Not Available | Not Available | Positive | 694623 - 694634 | Not Available |
| Clpb protein | SAMEA3472108_00693 | Not Available | Negative | 694851 - 697424 | 95590.8 |
| Signal recognition particle protein | SAMEA3472108_00710 | Not Available | Negative | 709574 - 710935 | 49790.5 |
| Inner membrane protein ypjd | SAMEA3472108_00711 | Not Available | Positive | 711027 - 711893 | 32131.5 |
| Hlyc/corc family transporter | SAMEA3472108_00712 | Not Available | Positive | 711959 - 713200 | 46301.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





