Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrolipoamide dehydrogenase | SAMEA3472108_03256 | Not Available | Negative | 3371776 - 3373200 | 50691.4 |
| dihydrolipoamide acetyltransferase component (e2) of pyruvate dehydrogenase | SAMEA3472108_03257 | Not Available | Negative | 3373408 - 3375300 | 66127.8 |
| pyruvate dehydrogenase e1 component | SAMEA3472108_03258 | Not Available | Negative | 3375315 - 3377978 | 99674.1 |
| transcriptional regulator protein | SAMEA3472108_03260 | Not Available | Negative | 3378139 - 3378903 | 29427.2 |
| aromatic amino acid transport protein | SAMEA3472108_03261 | Not Available | Positive | 3379447 - 3380817 | 49547.9 |
| inner membrane symporter yicj | SAMEA3472108_03262 | Not Available | Positive | 3380976 - 3382382 | 52656.4 |
| putative alpha-n-arabinofuranosidase ii | SAMEA3472108_03263 | Not Available | Positive | 3382382 - 3383332 | 36608.9 |
| ampe protein | SAMEA3472108_03264 | Not Available | Negative | 3383362 - 3384216 | 32167.9 |
| n-acetyl-anhydromuramyl-l-alanine-amidase | SAMEA3472108_03265 | Not Available | Negative | 3384213 - 3384764 | 20495.1 |
| quinolinate phosphoribosyltransferase | SAMEA3472108_03266 | Not Available | Positive | 3384852 - 3385745 | 32774.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





