Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamyl-q trna(asp) synthetase | SAMEA3472108_03226 | Not Available | Positive | 3340279 - 3341205 | 34843.5 |
| poly(a) polymerase | SAMEA3472108_03227 | Not Available | Positive | 3341298 - 3342662 | 52551.4 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridinepyrophosphokinase | SAMEA3472108_03228 | Not Available | Positive | 3342659 - 3343138 | 17817.5 |
| fimbrial protein | SAMEA3472108_03229 | Not Available | Positive | 3343481 - 3344077 | 20380.2 |
| chaperone protein ecpd | SAMEA3472108_03230 | Not Available | Positive | 3344164 - 3344889 | 26258.4 |
| outer membrane usher protein | SAMEA3472108_03231 | Not Available | Positive | 3344931 - 3347531 | 94674.0 |
| fimbrial protein | SAMEA3472108_03232 | Not Available | Positive | 3347545 - 3348093 | 18817.2 |
| fimbrial protein | SAMEA3472108_03233 | Not Available | Positive | 3348108 - 3348719 | 21156.0 |
| fimbrial protein | SAMEA3472108_03234 | Not Available | Positive | 3348740 - 3349330 | 21202.8 |
| fimbrial protein | SAMEA3472108_03235 | Not Available | Positive | 3349342 - 3350454 | 40111.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





