Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferrichrome transport system permease | SAMEA3472108_03216 | Not Available | Negative | 3326948 - 3328930 | 70338.4 |
| iron-hydroxamate transporter substrate-binding subunit | SAMEA3472108_03217 | Not Available | Negative | 3328927 - 3329817 | 33000.2 |
| ferrichrome transport atp-binding protein | SAMEA3472108_03218 | Not Available | Negative | 3329817 - 3330614 | 28872.2 |
| ferrichrome outer membrane transporter | SAMEA3472108_03219 | Not Available | Negative | 3330665 - 3332638 | 72944.5 |
| ferrichrome outer membrane transporter | SAMEA3472108_03220 | Not Available | Negative | 3332650 - 3332907 | 9274.6 |
| penicillin-binding protein 1b | SAMEA3472108_03221 | Not Available | Negative | 3333127 - 3335661 | 94270.0 |
| atp-dependent helicase hrpb | SAMEA3472108_03222 | Not Available | Negative | 3335857 - 3338286 | 89053.1 |
| 2'-5' rna ligase | SAMEA3472108_03223 | Not Available | Positive | 3338360 - 3338890 | 19981.1 |
| sugar fermentation stimulation protein | SAMEA3472108_03224 | Not Available | Positive | 3338905 - 3339609 | 26230.2 |
| rna polymerase-binding transcription factor | SAMEA3472108_03225 | Not Available | Positive | 3339787 - 3340242 | 17528.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





