Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0287 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1316662 bp
Thymine Count
1318217 bp
Guanine Count
1361169 bp
Cytosine Count
1321348 bp
Genome Length
5317590 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
503 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit alpha | SAMEA3472108_03185 | Not Available | Negative | 3292886 - 3296368 | 129898.0 |
| ribonuclease hii | SAMEA3472108_03186 | Not Available | Negative | 3296405 - 3297001 | 21553.3 |
| lipid-a-disaccharide synthase | SAMEA3472108_03187 | Not Available | Negative | 3296998 - 3298146 | 42434.0 |
| acyl-[acyl-carrier-protein]--udp-n-acetylglucos am ine o-acyltransferase | SAMEA3472108_03188 | Not Available | Negative | 3298146 - 3298934 | 28081.7 |
| (3r)-hydroxymyristoyl-acp dehydratase | SAMEA3472108_03189 | Not Available | Negative | 3298938 - 3299393 | 17034.0 |
| udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase | SAMEA3472108_03190 | Not Available | Negative | 3299498 - 3300523 | 36026.7 |
| chaperone protein | SAMEA3472108_03191 | Not Available | Negative | 3300527 - 3301012 | 17689.2 |
| outer membrane protein assembly factor | SAMEA3472108_03192 | Not Available | Negative | 3301134 - 3303566 | 90557.5 |
| zinc metallopeptidase rsep | SAMEA3472108_03193 | Not Available | Negative | 3303596 - 3304948 | 49074.2 |
| cdp-diglyceride synthase | SAMEA3472108_03194 | Not Available | Negative | 3304960 - 3305709 | 27572.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





